PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_57970g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 217aa    MW: 24972.4 Da    PI: 8.33
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_57970g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.4e-071381655
                   HHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH 16 iNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   +++ f++Lr+llP+ +     +K s ++    Av+YI++Lq
  MA_57970g0010  1 MKTLFSRLRSLLPEeN---LRGKRSESDQMLGAVNYICHLQ 38
                   6789**********66...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.0E-5155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.01E-4140No hitNo description
SuperFamilySSF474593.93E-8154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MKTLFSRLRS LLPEENLRGK RSESDQMLGA VNYICHLQQK MEDLSRERNR MKASLDRKEK  60
SYFVGMQFSS NDKFCGKHPR LQGSDGKIPS VKINSTLSGV KISLNAFQDR IVYSDLLMAL  120
EESGLEVLNV TSSSVNNTVF HTIHNKVFSH ARGKTKMPSL PYQNLNIHMS TLLQVCDTHY  180
FDMDDLYEKL WHFISDSQAD LGLWKDETNV RCRTSED
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1638838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.16e-18bHLH family protein